Modal Lightbox Gallery and Carousel Slider incompatible?

It seems quite challenging to add both the Bootstrap Carousel Slider and Lightbox Gallery in a single page without significant issues.

Problem: When clicking on the lightbox image gallery it opens up the picture gallery and at the same time the Carousel slider image gets hijacked by the gallery images. The culprit seems to be either the classes: .item, img, or .inner-carousel

Is it possible to add both modal lighbox and carousel slider to a single page without any issues?

To recreate the issue: Click on the image gallery, the modal will pop up, close the window, and now the carousel slider has been replaced by the gallery images. http://jsfiddle.net/2aasoyej/

HTML:

<div class="container">
  <div class="row">
    <h1>Bootstrap 3 lightbox hidden gallery using modal</h1>
        <hr>

    <div class="row">

                <div class="col-12 col-md-4 col-sm-6">
                    <a title="Image 1" href="#"> 
                        <img class="thumbnail img-responsive" id="image-1" src="http://dummyimage.com/600x350/ccc/969696&amp;text=0xD10x810xD00xB50xD10x800xD10x8B0xD00xB9">
                    </a>
                </div>

                <div class="col-12 col-md-4 col-sm-6">
                    <a title="Image 2" href="#"> 
                        <img class="thumbnail img-responsive" id="image-2" src="http://dummyimage.com/600x350/2255EE/969696&amp;text=0xD10x810xD00xB80xD00xBD0xD00xB80xD00xB9">
                    </a>

                </div>
                <div class="col-12 col-md-4 col-sm-6">
                    <a title="Image 3" href="#"> 
                        <img class="thumbnail img-responsive" id="image-3" src="http://dummyimage.com/600x350/449955/FFF&amp;text=0xD00xB70xD00xB50xD00xBB0xD00xB50xD00xBD0xD10x8B0xD00xB9">
                    </a>
                </div>
    </div>

    <hr>

  </div>
</div>

    <div class="hidden" id="img-repo">

        <!-- #image-1 -->
        <div class="item" id="image-1">
            <img class="thumbnail img-responsive" title="Image 11" src="http://dummyimage.com/600x350/ccc/969696">
        </div>
        <div class="item" id="image-1">
            <img class="thumbnail img-responsive" title="Image 12" src="http://dummyimage.com/600x600/ccc/969696">
        </div>
        <div class="item" id="image-1">
            <img class="thumbnail img-responsive" title="Image 13" src="http://dummyimage.com/300x300/ccc/969696">
        </div>

        <!-- #image-2 -->
        <div class="item" id="image-2">
            <img class="thumbnail img-responsive" title="Image 21" src="http://dummyimage.com/600x350/2255EE/969696">
        </div>
        <div class="item" id="image-2">
            <img class="thumbnail img-responsive" title="Image 21" src="http://dummyimage.com/600x600/2255EE/969696">
        </div>
        <div class="item" id="image-2">
            <img class="thumbnail img-responsive" title="Image 23" src="http://dummyimage.com/300x300/2255EE/969696">
        </div>   

        <!-- #image-3-->
        <div class="item" id="image-3">
            <img class="thumbnail img-responsive" title="Image 31" src="http://dummyimage.com/600x350/449955/FFF">
        </div>
        <div class="item" id="image-3">
            <img class="thumbnail img-responsive" title="Image 32" src="http://dummyimage.com/600x600/449955/FFF">
        </div>
        <div class="item" id="image-3">
            <img class="thumbnail img-responsive" title="Image 33" src="http://dummyimage.com/300x300/449955/FFF">
        </div>        

    </div>

<div class="modal" id="modal-gallery" role="dialog">
  <div class="modal-dialog">
    <div class="modal-content">
      <div class="modal-header">
          <button class="close" type="button" data-dismiss="modal">×</button>
          <h3 class="modal-title"></h3>
      </div>
      <div class="modal-body">
          <div id="modal-carousel" class="carousel">

            <div class="carousel-inner">           
            </div>

            <a class="carousel-control left" href="#modal-carousel" data-slide="prev"><i class="glyphicon glyphicon-chevron-left"></i></a>
            <a class="carousel-control right" href="#modal-carousel" data-slide="next"><i class="glyphicon glyphicon-chevron-right"></i></a>

          </div>
      </div>
      <div class="modal-footer">
          <button class="btn btn-default" data-dismiss="modal">Close</button>
      </div>
    </div>
  </div>
</div>





        <!-- Header Carousel -->
    <header id="myCarousel" class="carousel slide">
        <!-- Indicators -->
        <ol class="carousel-indicators">
            <li data-target="#myCarousel" data-slide-to="0" class="active"></li>
            <li data-target="#myCarousel" data-slide-to="1"></li>
            <li data-target="#myCarousel" data-slide-to="2"></li>
        </ol>

        <!-- Wrapper for slides -->
        <div class="carousel-inner">
            <div class="item active">

                <div class="fill" style="background-image:url('http://placehold.it/1900x1080&text=Slide One');">    
                <center>
                <div class="carousel-title">
                    <h1>Certified General Contractor</h1>
                </div>

                </center>
                </div>

                <div class="carousel-caption">

                    <h2>For all your South Florida construction needs</h2>
                </div>
            </div>
            <div class="item">
                <div class="fill" style="background-image:url('http://placehold.it/1900x1080&text=Slide Two');">
                        <center>
                <div class="carousel-title">
                    <h1>Commercial Contruction</h1>
                </div>

                </center>
                    </div>
                <div class="carousel-caption">
                    <h2>Build with a company you can trust</h2>
                </div>
            </div>
            <div class="item">
                <div class="fill" style="background-image:url('http://placehold.it/1900x1080&text=Slide Three');">

                    <center>
                <div class="carousel-title">
                    <h1>Home Renovation</h1>
                </div>

                </center>
            </div>
                <div class="carousel-caption">
                    <h2>Remodel your home with the best in the field</h2>
                </div>
            </div>
        </div>

        <!-- Controls -->
        <a class="left carousel-control" href="#myCarousel" data-slide="prev">
            <span class="icon-prev" style="font-size:70px;"></span>
        </a>
        <a class="right carousel-control" href="#myCarousel" data-slide="next">
            <span class="icon-next" style="font-size:70px;"></span>
        </a>

JS:

var $item = $('.carousel .item'); 
var $wHeight = $(window).height();
$item.eq(0).addClass('active');
$item.height($wHeight); 
$item.addClass('full-screen');

$('.carousel img').each(function() {
  var $src = $(this).attr('src');
  var $color = $(this).attr('data-color');
  $(this).parent().css({
    'background-image' : 'url(' + $src + ')',
    'background-color' : $color
  });
  $(this).remove();
});

$(window).on('resize', function (){
  $wHeight = $(window).height();
  $item.height($wHeight);
});

$('.carousel').carousel({
  interval: 6000,
  pause: "false"
});